Uses single-molecule spectroscopy, optical trapping, and advanced imaging to study nanoscale systems. Directions: (1) orientation-resolved single-molecule spectroscopy using polarization-controlled excitation and detection; (2) optical trapping of individual nanoparticles and viruses to study force-dependent dynamics; (3) plasmon-enhanced single-molecule detection and imaging beyond diffraction limit; (4) ultrafast spectroscopy of nanoscale energy transfer.
Shaevitz combines custom super-resolution and multifocal/3D imaging instrumentation with single-molecule tracking to make precision measurements of bacterial cell-shape mechanics, cytoskeletal dynamics (e.g. MreB), collective motility and pattern formation, and animal behavior quantification. His lab pioneered 3D live-cell imaging of bacterial shape during growth and continues to develop chromatic multifocal and localization-microscopy instrumentation in collaboration with the Yang and Gregor labs.
Sierecki co-developed the cell-free single-molecule interaction platform with Gambin and runs a group applying it to protein interaction networks: mapping which proteins bind which, with what affinity and in what stoichiometry, at throughput high enough to screen rather than characterise one pair at a time. Recent applications include viral protein-host interactions and transcription factor complexes. Positioned against the established body of NV-ensemble quantum sensing work — DEER, nanoscale NMR and T1 relaxometry protocols operating at pT/sqrt(Hz) field sensitivity — the relevance to a quantum-sensing candidate is as a source of well-characterised, quantitatively-defined biological targets: a pT/sqrt(Hz)-class sensor is only useful in biology if someone can tell you exactly what molecular species is present and at what concentration, which is what this platform delivers. Borderline inclusion — no quantum or physics-instrumentation component — kept because single-molecule technique development is the core of the group.
Smith runs Melbourne's time-resolved fluorescence facility and specialises in the information channels most people throw away: fluorescence lifetime, anisotropy decay and its orientational content, and single-molecule photophysics, applied to organic semiconductors, energy-transfer systems and biological samples. The group builds its own confocal microspectroscopy instrumentation for time-resolved anisotropy imaging and single-molecule detection. Positioned against the established body of NV-ensemble quantum sensing work — DEER, nanoscale NMR and T1 relaxometry protocols operating at pT/sqrt(Hz) field sensitivity — lifetime- and orientation-resolved fluorescence is the principal orthogonal contrast mechanism to spin-based sensing, and his instrumentation is the natural correlative partner for NV-ensemble DEER/relaxometry experiments at pT/sqrt(Hz) that need an independent optical readout of the same specimen. Preferred attribute present: orientation- and lifetime-resolved methods.
Research centers on manipulating and measuring single molecules with quantum-level precision. Primary platform: ABEL trap (Anti-Brownian ELectrokinetic trap) for single-molecule confinement in free solution without surface tethering, enabling measurement of spectroscopic identity, molecular dynamics, and nanoscale energy transfer at femtomolar concentrations. Also develops orientation-resolved single-molecule imaging and single-molecule FRET for photoadaptation in photosynthetic systems and nanoscale immune cell signaling. QuBBE member. PhD Physics UChicago; joined 2024.
Willem Vanderlinden uses high-resolution biophysical tools to study protein-nucleic acid interactions. Research: (1) magnetic tweezers for pN-scale force and torque measurements on single DNA molecules and nucleoprotein complexes during retroviral integration, DNA supercoiling, and chromatin remodelling; (2) high-speed AFM imaging of nucleoprotein complexes and chromosomal organisation; (3) quantitative single-molecule statistical analysis of DNA topology. His approach provides cutting-edge spatial resolution to study chromatin biophysics and mobile DNA elements at the single-molecule level.
Wickham builds DNA origami nanostructures — programmable, self-assembling scaffolds with nanometre-precision addressability — and uses them as molecular machines, drug-delivery vehicles and, most relevantly, as rulers and probes for single-molecule measurement. DNA origami is the standard platform for DNA-PAINT super-resolution and for positioning fluorophores, nanoparticles or spin labels at defined separations, and her group works on dynamic, reconfigurable devices that respond to biological triggers. Positioned against the established body of NV-ensemble quantum sensing work — DEER, nanoscale NMR and T1 relaxometry protocols operating at pT/sqrt(Hz) field sensitivity — DNA origami is the leading candidate technology for positioning target molecules at a controlled standoff from a near-surface NV ensemble, which is the central geometric problem in pushing NV nanoscale NMR and DEER from pT/sqrt(Hz) ensembles down to single-molecule sensitivity. Genuinely complementary skill set for a quantum-sensing candidate.
Yang's experimental physical chemistry lab designs new instrumentation to track single proteins, nanoparticles, and other emitters in three dimensions in real time within complex, heterogeneous environments, including a recent time-gated two-photon platform for high-speed 3D single-particle tracking. His group applies these single-molecule tracking and orientation-resolved imaging tools to protein conformational dynamics, functional nanostructures, and active-matter systems.
Yildiz uses nanometer-precision single-molecule fluorescence and optical/magnetic tweezers (FIONA-type localization) to resolve the stepping mechanisms of cytoskeletal motor proteins such as myosin, kinesin, and dynein in living cells.
Zhuang invented STORM super-resolution microscopy and MERFISH multiplexed spatial transcriptomics, and her lab continues to push single-molecule and multiplexed imaging techniques (e.g. a recent whole-olfactory-system map) to resolve cellular structures and RNA populations at nanometer-to-single-molecule resolution, well beyond the diffraction limit.