Tags - (32) biophysics

Department(s)/lab(s): Applied Physics, Molecular and Cellular Biology | Needleman Lab @ Harvard
Summary:

Needleman combines polarized-light microscopy, second-harmonic generation, single-molecule tracking, and fluorescence-lifetime (FLIM) metabolic imaging to study self-organization of the mitotic spindle and, in a clinically translated direction, non-invasive metabolic imaging of human oocytes and embryos for IVF viability assessment — an orientation- and lifetime-resolved imaging program with an active human-trial/clinical translation component.

Department(s)/lab(s): Physics & Astronomy – Biophysics | Nguyen Lab (Nanomaterials for Biosensing) @ UCL
Summary:

Nguyen's group at UCL (based at Royal Institution) focuses on magnetic and fluorescent nanoparticles for biomedical sensing and therapy. Research directions: (1) Magnetic nanoparticle synthesis — iron oxide (SPION) and other magnetic nanoparticles with controlled size, shape, and surface chemistry for MRI contrast and magnetic hyperthermia; (2) Biosensing platforms — functionalized nanoparticles as MRI-detectable sensors for specific biomolecular targets; magnetic particle imaging (MPI) for real-time tracking; (3) Plasmonic nanoparticles — gold nanoparticles for optical biosensing and photothermal therapy; (4) Fluorescent nanoparticles — QD- and dye-conjugated probes for live-cell imaging. Relevant to quantum sensing through magnetic nanoparticle platforms.

Department(s)/lab(s): Institute of Biomaterials and Biomolecular Systems | Nussberger Lab - Biophysics @ Stuttgart
Summary:

Nussberger holds the biophysics chair at Stuttgart's Institute of Biomaterials and Biomolecular Systems. The group studies how proteins cross and insert into membranes -- mitochondrial protein translocases (TOM complex), apoptosis-related pore formation -- using single-channel electrophysiology, single-molecule fluorescence and structural methods, and has pushed this into an explicit nanopore/biosensing line: engineered protein and DNA-based pores as single-molecule sensors, including the DNA-origami nanosyringe for directed membrane translocation published with Na Liu's group. Relative to the established NV-ensemble quantum-sensing playbook (DEER, nanoscale NMR, T1 relaxometry at pT/sqrt(Hz) ensemble sensitivity), the relevance is the readout channel: nanopore sensing is the electrical single-molecule counterpart to optical single-molecule detection, and the group's membrane expertise is exactly what an in-cell quantum-sensing project needs when the question becomes how to get the probe across a bilayer.

Department(s)/lab(s): Physics | Palmer Lab @ UChicago
Summary:

Uses information theory and statistical physics to study neural circuit sensing. Directions: (1) multi-electrode array recording from salamander and mouse retina to map how retinal ganglion cells encode and predict natural visual scenes; (2) information-theoretic quantification of predictive coding strategies in sensory neurons; (3) developing statistical models of population neural codes. Technique focus: high-density multi-electrode arrays as a sensing platform for neural population dynamics. Joint appointment Organismal Biology and Anatomy.

Department(s)/lab(s): Physics | Prentiss Lab @ Harvard
Summary:

Prentiss's group works on cold-atom light-pulse interferometry for compact, potentially fieldable inertial sensors (gravimeters/gyroscopes), alongside a parallel biophysics program using optical tweezers and single-molecule methods to study DNA and cell mechanics. The atom-interferometric sensing work is squarely in the quantum-sensing gravimetry/inertial-navigation tradition alongside cold-atom-gradiometer and atom-chip clock efforts elsewhere in the field.

Department(s)/lab(s): Molecular and Cellular Biology, Applied Physics | Prigozhin Lab @ Harvard
Summary:

Prigozhin develops multicolor electron microscopy using cathodoluminescent nanoprobe protein tags and time-resolved cryo-vitrification methods to capture the nanoscale, sub-second dynamics of GPCR signaling and biomolecular condensate formation, aiming to add molecular-scale color and temporal resolution to electron microscopy's inherent nanoscale spatial resolution.

Department(s)/lab(s): Biochemistry and Molecular Biology | Rock Lab @ UChicago
Summary:

Rock builds custom single-molecule fluorescence microscopes and optical tweezers to directly watch individual myosin motors move along the actin cytoskeleton in vitro and in living cells, quantifying motor stoichiometry, force generation, and navigation rules that organize cell shape and motility. Where NV-ensemble quantum sensors read out spin ensembles magnetically at pT/sqrt(Hz) sensitivity via DEER/NMR/T1 protocols, Rock's approach achieves single-fluorophore and single-motor mechanical/positional resolution using all-optical single-molecule methods.

Department(s)/lab(s): Physics | Rust Lab @ UChicago
Summary:

Applies advanced single-molecule biosensing to study the cyanobacterial circadian clock — the only fully reconstitutable in vitro biochemical oscillator. Directions: (1) single-molecule FRET and fluorescence imaging to track conformational states of KaiC ATPase during clock cycles with single-protein resolution; (2) single-molecule reconstitution of the complete KaiA/KaiB/KaiC oscillator; (3) mathematical modeling of biochemical oscillation. Technique focus: single-molecule fluorescence as quantitative biosensing tool for protein conformational dynamics. Joint appointment Microbiology.

Department(s)/lab(s): EMBL Australia Node in Single Molecule Science, UNSW Medicine and Health | Sierecki Protein Interaction Networks Group @ UNSW
Summary:

Sierecki co-developed the cell-free single-molecule interaction platform with Gambin and runs a group applying it to protein interaction networks: mapping which proteins bind which, with what affinity and in what stoichiometry, at throughput high enough to screen rather than characterise one pair at a time. Recent applications include viral protein-host interactions and transcription factor complexes. Positioned against the established body of NV-ensemble quantum sensing work — DEER, nanoscale NMR and T1 relaxometry protocols operating at pT/sqrt(Hz) field sensitivity — the relevance to a quantum-sensing candidate is as a source of well-characterised, quantitatively-defined biological targets: a pT/sqrt(Hz)-class sensor is only useful in biology if someone can tell you exactly what molecular species is present and at what concentration, which is what this platform delivers. Borderline inclusion — no quantum or physics-instrumentation component — kept because single-molecule technique development is the core of the group.

Department(s)/lab(s): PME | Squires Lab @ UChicago
Summary:

Research centers on manipulating and measuring single molecules with quantum-level precision. Primary platform: ABEL trap (Anti-Brownian ELectrokinetic trap) for single-molecule confinement in free solution without surface tethering, enabling measurement of spectroscopic identity, molecular dynamics, and nanoscale energy transfer at femtomolar concentrations. Also develops orientation-resolved single-molecule imaging and single-molecule FRET for photoadaptation in photosynthetic systems and nanoscale immune cell signaling. QuBBE member. PhD Physics UChicago; joined 2024.